X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=pipelinepdscommand.h;h=22386bcc697c2e3c64767ad99dd9fafaaa5d206f;hb=70491a12902e89b85cfa6b44a7b7fbe066ee2ac1;hp=c4b4646881f5c1b6bfbd9a682bda765a70c4193f;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/pipelinepdscommand.h b/pipelinepdscommand.h
index c4b4646..22386bc 100644
--- a/pipelinepdscommand.h
+++ b/pipelinepdscommand.h
@@ -27,7 +27,10 @@ public:
 	string getCommandName()			{ return "pipeline.pds";	}
 	string getCommandCategory()		{ return "Hidden";			}
 	string getHelpString();	
-	string getCitation() { return "http://www.mothur.org/wiki/Pipeline.pds"; }
+    string getOutputPattern(string) { return ""; }	
+	string getCitation() { return "Schloss PD, Gevers D, Westcott SL (2011).  Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies.  PLoS ONE.  6:e27310.\nhttp://www.mothur.org/wiki/Pipeline.pds"; }
+	string getDescription()		{ return "pat's pipeline"; }
+
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }