X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=pipelinepdscommand.cpp;fp=pipelinepdscommand.cpp;h=a174cce11a3b4c928c3b08a817d534ad149822bb;hb=134a9c1275862a6b3ea10a2c0f11965c0a535854;hp=ae2663df8e63b117995b3442227f72343e194bbb;hpb=191ae1be0679d5cf4eda950b3b1bf26fb7dd503d;p=mothur.git diff --git a/pipelinepdscommand.cpp b/pipelinepdscommand.cpp index ae2663d..a174cce 100644 --- a/pipelinepdscommand.cpp +++ b/pipelinepdscommand.cpp @@ -358,6 +358,8 @@ bool PipelineCommand::checkForValidAndRequiredParameters(string name, string opt if (name == "system") { return false; } + if (name == "system") { return false; } + //get shell of the command so we can check to make sure its valid without running it Command* command = cFactory->getCommand(name);