X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=phylotypecommand.h;h=7fe10af58dde8ae842be2496376b3569df49bd29;hb=f12174bc43f9e8ad536f2a37fb3a763b1ac90ba9;hp=a0411308e01121af1a56a68dd28218b421598cbc;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/phylotypecommand.h b/phylotypecommand.h
index a041130..7fe10af 100644
--- a/phylotypecommand.h
+++ b/phylotypecommand.h
@@ -26,9 +26,12 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "phylotype";		}
 	string getCommandCategory()		{ return "Clustering";		}
+	
 	string getHelpString();	
+    string getOutputPattern(string);	
 	string getCitation() { return "http://www.mothur.org/wiki/Phylotype"; }
-	
+	string getDescription()		{ return "cluster your sequences into OTUs based on their classifications"; }
+
 	int execute();
 	void help() { m->mothurOut(getHelpString()); }