X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=phylotypecommand.h;h=0e315ec7c4ef4fcdabc34b4037d7f8bba53cfea2;hb=e8e13c129ba8184ec5932a090773f353f3ae3406;hp=a0411308e01121af1a56a68dd28218b421598cbc;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git diff --git a/phylotypecommand.h b/phylotypecommand.h index a041130..0e315ec 100644 --- a/phylotypecommand.h +++ b/phylotypecommand.h @@ -26,9 +26,11 @@ public: vector setParameters(); string getCommandName() { return "phylotype"; } string getCommandCategory() { return "Clustering"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Phylotype"; } - + string getDescription() { return "cluster your sequences into OTUs based on their classifications"; } + int execute(); void help() { m->mothurOut(getHelpString()); }