X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=phylodiversitycommand.h;h=ec372ba20acac93709ca4fff0b58c8a42dadf048;hb=1a968f34ae2d2680eaf189a197d1a21b8dfd6c03;hp=ee76f05697cfce07213857432c9d786b150fc033;hpb=90708fe9701e3827e477c82fb3652539c3bf2a0d;p=mothur.git diff --git a/phylodiversitycommand.h b/phylodiversitycommand.h index ee76f05..ec372ba 100644 --- a/phylodiversitycommand.h +++ b/phylodiversitycommand.h @@ -25,8 +25,9 @@ class PhyloDiversityCommand : public Command { vector setParameters(); string getCommandName() { return "phylo.diversity"; } string getCommandCategory() { return "Hypothesis Testing"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "Faith DP (1994). Phylogenetic pattern and the quantification of organismal biodiversity. Philos Trans R Soc Lond B Biol Sci 345: 45-58. \nhttp://www.mothur.org/wiki/Phylo.diversity"; } string getDescription() { return "phylo.diversity"; }