X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=parsimonycommand.h;h=ba30d4016886123c1d8b33967899d699619b30b4;hb=3c5c4e255ee8c36feb9e97aebc4e792e6ff8c440;hp=2881dc61e200540588691de3f205420139510561;hpb=0190105145fbd3e02da8f23cb50841229e5d696f;p=mothur.git diff --git a/parsimonycommand.h b/parsimonycommand.h index 2881dc6..ba30d40 100644 --- a/parsimonycommand.h +++ b/parsimonycommand.h @@ -32,7 +32,7 @@ class ParsimonyCommand : public Command { TreeMap* tmap; TreeMap* savetmap; Parsimony* pars; - string parsFile, sumFile, distFile, randomtree; + string parsFile, sumFile, randomtree; int iters, numGroups; vector numEachGroup; //vector containing the number of sequences in each group the users wants for random distrib. vector userTreeScores; //scores for users trees @@ -47,7 +47,7 @@ class ParsimonyCommand : public Command { map::iterator it; map::iterator it2; - ofstream out, outSum, outDist; + ofstream out, outSum; void printParsimonyFile(); void printUSummaryFile();