X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=parsimonycommand.h;h=917255696166a505ae5734e20f0aaab47573876c;hb=ee8403d4eb5760187d62b42a9cf4272de8fc0ec4;hp=81fa99ba06c691f9e0ee06f4b73521655b046e8c;hpb=a44542a3c740cf957cff72ac71742f2fe48b0eaf;p=mothur.git

diff --git a/parsimonycommand.h b/parsimonycommand.h
index 81fa99b..9172556 100644
--- a/parsimonycommand.h
+++ b/parsimonycommand.h
@@ -36,15 +36,12 @@ public:
 	void help() { m->mothurOut(getHelpString()); }
 	
 private:
-	ReadTree* read;
-	SharedUtil* util;
 	FileOutput* output;
 	vector<Tree*> T;	   //user trees
 	Tree* randT;  //random tree
 	Tree* copyUserTree; 
 	TreeMap* tmap; 
 	TreeMap* savetmap;
-	Parsimony* pars;
 	vector<string> groupComb; // AB. AC, BC...
 	string sumFile, randomtree, allGroups, outputDir, treefile, groupfile, namefile;
 	int iters, numGroups, numComp, counter, processors, numUniquesInName;