X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=parsimonycommand.h;h=79613f560746e443697e4e92bfed755605a6fe4a;hb=f06b339c5fc4b6d1b9d2a08fe16bf7670bf7aeb4;hp=917255696166a505ae5734e20f0aaab47573876c;hpb=d2390ede25cc211f95f99e377d5654bad7e6950e;p=mothur.git

diff --git a/parsimonycommand.h b/parsimonycommand.h
index 9172556..79613f5 100644
--- a/parsimonycommand.h
+++ b/parsimonycommand.h
@@ -28,6 +28,7 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "parsimony";				}
 	string getCommandCategory()		{ return "Hypothesis Testing";		}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
 	string getCitation() { return "Slatkin M, Maddison WP (1989). A cladistic measure of gene flow inferred from the phylogenies of alleles. Genetics 123: 603-13. \nSlatkin M, Maddison WP (1990). Detecting isolation by distance using phylogenies of genes. Genetics 126: 249-60. \nMartin AP (2002). Phylogenetic approaches for describing and comparing the diversity of microbial communities. Appl Environ Microbiol 68: 3673-82. \nSchloss PD, Handelsman J (2006). Introducing TreeClimber, a test to compare microbial community structure. Appl Environ Microbiol 72: 2379-84.\nhttp://www.mothur.org/wiki/Parsimony"; }
 	string getDescription()		{ return "generic test that describes whether two or more communities have the same structure"; }