X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=parsimony.h;h=bf0e0d4f90198ef353c2c1899414f699454c8a7e;hb=2cfb747aa8f63bde9c1114001e6d2e81ccd26178;hp=7316d508dd52729c8ddec87c34a08c76586cd4d1;hpb=f55cf350ca6643f8eb070d8336e1957699a3f109;p=mothur.git

diff --git a/parsimony.h b/parsimony.h
index 7316d50..bf0e0d4 100644
--- a/parsimony.h
+++ b/parsimony.h
@@ -12,7 +12,7 @@
  */
 
 #include "treecalculator.h"
-#include "treemap.h"
+#include "counttable.h"
 
 /***********************************************************************/
 
@@ -35,8 +35,8 @@ class Parsimony : public TreeCalculator  {
 		int processors;
 		string outputDir;
 	
-		EstOutput driver(Tree*, vector< vector<string> >, int, int, TreeMap*); 
-		EstOutput createProcesses(Tree*, vector< vector<string> >, TreeMap*);
+		EstOutput driver(Tree*, vector< vector<string> >, int, int, CountTable*); 
+		EstOutput createProcesses(Tree*, vector< vector<string> >, CountTable*);
 };
 
 /***********************************************************************/