X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=parsimony.h;fp=parsimony.h;h=bf0e0d4f90198ef353c2c1899414f699454c8a7e;hb=6c2b1e530a5c0bb87040e58a3e410097acdfcc3d;hp=7316d508dd52729c8ddec87c34a08c76586cd4d1;hpb=f509429e06e545bde69c97cacc0eb436775bd329;p=mothur.git

diff --git a/parsimony.h b/parsimony.h
index 7316d50..bf0e0d4 100644
--- a/parsimony.h
+++ b/parsimony.h
@@ -12,7 +12,7 @@
  */
 
 #include "treecalculator.h"
-#include "treemap.h"
+#include "counttable.h"
 
 /***********************************************************************/
 
@@ -35,8 +35,8 @@ class Parsimony : public TreeCalculator  {
 		int processors;
 		string outputDir;
 	
-		EstOutput driver(Tree*, vector< vector<string> >, int, int, TreeMap*); 
-		EstOutput createProcesses(Tree*, vector< vector<string> >, TreeMap*);
+		EstOutput driver(Tree*, vector< vector<string> >, int, int, CountTable*); 
+		EstOutput createProcesses(Tree*, vector< vector<string> >, CountTable*);
 };
 
 /***********************************************************************/