X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=parsefastaqcommand.h;h=5ae6b9c482fe6b4022bb4d4c5d4ae2e79ea3aad8;hb=a0f1fca79d2ddfa7ad36b4485039c68b5704fe8d;hp=b4d90e542a98f329dd166a93c54d57852e0f54dd;hpb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;p=mothur.git diff --git a/parsefastaqcommand.h b/parsefastaqcommand.h index b4d90e5..5ae6b9c 100644 --- a/parsefastaqcommand.h +++ b/parsefastaqcommand.h @@ -21,7 +21,7 @@ public: ~ParseFastaQCommand() {} vector setParameters(); - string getCommandName() { return "parse.fastq"; } + string getCommandName() { return "fastq.info"; } string getCommandCategory() { return "Sequence Processing"; } string getHelpString(); @@ -36,7 +36,7 @@ private: vector outputNames; string outputDir, fastaQFile, format; - bool abort, fasta, qual; + bool abort, fasta, qual, pacbio; vector convertQual(string); vector convertTable;