X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=pairwiseseqscommand.cpp;h=767fdb52702bd1a3652d6bf2c1e2b244958e48ca;hb=567e4bca5d62bd8ea316ce5def320d070d7507b8;hp=0f8602871561c20804b49bdc948da6194b25adbe;hpb=deba0af0ccdcb6005ed5b2b82649b137c63fbdf7;p=mothur.git

diff --git a/pairwiseseqscommand.cpp b/pairwiseseqscommand.cpp
index 0f86028..767fdb5 100644
--- a/pairwiseseqscommand.cpp
+++ b/pairwiseseqscommand.cpp
@@ -581,6 +581,9 @@ void PairwiseSeqsCommand::createProcesses(string filename) {
 		
 		//Close all thread handles and free memory allocations.
 		for(int i=0; i < pDataArray.size(); i++){
+            if (pDataArray[i]->count != (pDataArray[i]->end-pDataArray[i]->start)) {
+                m->mothurOut("[ERROR]: process " + toString(i) + " only processed " + toString(pDataArray[i]->count) + " of " + toString(pDataArray[i]->end-pDataArray[i]->start) + " sequences assigned to it, quitting. \n"); m->control_pressed = true; 
+            }
 			CloseHandle(hThreadArray[i]);
 			delete pDataArray[i];
 		}