X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=optionparser.h;h=044299d43e51442aa673611003c00a80f557deaf;hb=541bab1dac00688b4c3a8c4a95ab464412663c50;hp=7707e739ce15d7e0dd6657bc08a288222dfbdbb0;hpb=74844a60d80c6dd06e3fb02ee9b928424f9019b0;p=mothur.git

diff --git a/optionparser.h b/optionparser.h
index 7707e73..044299d 100644
--- a/optionparser.h
+++ b/optionparser.h
@@ -14,15 +14,17 @@
 
 #include "mothur.h"
 #include "mothurout.h"
-
+#include "command.hpp"
 
 /***********************************************************************/
 
 class OptionParser {
 public:
 	OptionParser(string);
+    OptionParser(string, map<string, string>&);
 	~OptionParser() {}
 	map<string, string> getParameters();
+	bool getNameFile(vector<string>);
 private:
 	map<string, string> parameters;
 	MothurOut* m;