X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=optionparser.h;fp=optionparser.h;h=facd1f85182cc526a6db01d85968d9231afcfc88;hb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc;hp=0000000000000000000000000000000000000000;hpb=1b73ff67c83892a025e597dabd9df6fe7b58206a;p=mothur.git

diff --git a/optionparser.h b/optionparser.h
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+++ b/optionparser.h
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+#ifndef OPTIONPARSER_H
+#define OPTIONPARSER_H
+
+/*
+ *  optionparser.h
+ *  Mothur
+ *
+ *  Created by Sarah Westcott on 6/8/09.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
+ *
+ */
+
+
+
+#include "mothur.h"
+#include "mothurout.h"
+#include "command.hpp"
+
+/***********************************************************************/
+
+class OptionParser {
+public:
+	OptionParser(string);
+	~OptionParser() {}
+	map<string, string> getParameters();
+	bool getNameFile(vector<string>);
+private:
+	map<string, string> parameters;
+	MothurOut* m;
+};
+
+/***********************************************************************/
+
+#endif