X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=neurodebian.cfg;h=caab129a3a7d8cd0c6419dd4b79de78505ed3e19;hb=8e10fad174a8de48fd05686b09370a0a58ec787c;hp=d74521c9be5f44c12ddeef0dbfd295ab6b0ab9ef;hpb=f34117a7364e73a85c5a14388df2c19a9368ed3a;p=neurodebian.git diff --git a/neurodebian.cfg b/neurodebian.cfg index d74521c..caab129 100644 --- a/neurodebian.cfg +++ b/neurodebian.cfg @@ -5,19 +5,33 @@ pkgquery_url = http://dde.debian.net/dde/q/udd # Packages listed in the following taskfiles will be featured on the website # _if_ they are also present in the repository select taskfiles = + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev + svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/psychology # Additional selection filter (similar to 'select taskfiles'), only listing # package names -select names = libnifti1 odin mitools afni-atlases python-pyssdh python-networkx +select names = libnifti2 odin mitools afni-atlases python-pyssdh python-networkx r-cran-glmnet python-rpy2 python-nibabel-snapshot - python-scikits-learn python-mdp + python-scikits-learn python-mdp python-mlpy python-openpyxl libgdf-dev matlab-support + svgtune rorden-mri-tutorial caret-data python-joblib python-sphinx # Information about prospective packages to be imported from taskfiles prospective = + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev @@ -26,18 +40,35 @@ prospective = # package names -- if the original name should appear in the package list it has # to be added as an alias as well mni-icbm152-nlin-2009 = mni-icbm152-nlin-2009a mni-icbm152-nlin-2009b mni-icbm152-nlin-2009c -fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds +fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds fsl-mni152-templates fslview = fslview fslview-doc python-mvpa = python-mvpa python-mvpa-snapshot libgiftiio-dev = libgiftiio-dev gifti-bin +openmeeg-tools = openmeeg-tools libopenmeeg-dev python-openmeeg libopenmeeg1 +libbiosig-dev = libbiosig-dev python-biosig octave-biosig biosig-tools libbiosig0 +libgdf-dev = libgdf-dev libgdf0 libgdf0-dbg libgdf-dev gdf-tools octave-gdf matlab-gdf +spm8 = matlab-spm8 spm8-data spm8-doc +libfreenect-dev = libfreenect0.0 libfreenect-dev libfreenect-demos python-freenect freenect +psychtoolbox-3 = octave-psychtoolbox-3 matlab-psychtoolbox-3 psychtoolbox-3-doc [mirrors] -us = http://neuro.debian.net/debian de = http://apsy.gse.uni-magdeburg.de/debian +gr = http://neurobot.bio.auth.gr/neurodebian +us-ca = http://neurodeb.pirsquared.org +us-nh = http://neuro.debian.net/debian +us-tn = http://masi.vuse.vanderbilt.edu/neurodebian + +[mirror names] +de = Germany (University of Magdeburg) +gr = Greece (Aristotle University of Thessaloniki) +us-ca = USA-CA (Paul Ivanov) +us-nh = USA-NH (Dartmouth College) +us-tn = USA-TN (Vanderbilt) [neurodebian] # Release files of all repositories to be contained in the website releases = + http://neuro.debian.net/debian/dists/data/Release http://neuro.debian.net/debian/dists/dapper/Release http://neuro.debian.net/debian/dists/gutsy/Release http://neuro.debian.net/debian/dists/hardy/Release @@ -45,25 +76,51 @@ releases = http://neuro.debian.net/debian/dists/jaunty/Release http://neuro.debian.net/debian/dists/karmic/Release http://neuro.debian.net/debian/dists/lucid/Release + http://neuro.debian.net/debian/dists/maverick/Release http://neuro.debian.net/debian/dists/etch/Release http://neuro.debian.net/debian/dists/lenny/Release http://neuro.debian.net/debian/dists/squeeze/Release + http://neuro.debian.net/debian/dists/wheezy/Release http://neuro.debian.net/debian/dists/sid/Release [release codenames] -etch = Debian GNU/Linux 4.0 (etch) +# the 'data' entry should not be changed, as this exact setting also serves as +# a test condition in the DDE code +data = Datasets (data) +#etch = Debian GNU/Linux 4.0 (etch) lenny = Debian GNU/Linux 5.0 (lenny) -squeeze = Debian testing (squeeze) +squeeze = Debian GNU/Linux 6.0 (squeeze) +wheezy = Debian testing (wheezy) sid = Debian unstable (sid) #dapper = Ubuntu 06.06 LTS "Dapper Drake" (dapper) #edgy = Ubuntu 06.10 "Edgy Eft" (edgy) #gutsy = Ubuntu 07.10 "Gutsy Gibbon" (gutsy) -hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy) -intrepid = Ubuntu 08.10 "Intrepid Ibex" (intrepid) +#hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy) +#intrepid = Ubuntu 08.10 "Intrepid Ibex" (intrepid) jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty) karmic = Ubuntu 09.10 "Karmic Koala" (karmic) -lucid = Ubuntu 10.4 LTS "Lucid Lynx" (lucid) -#lucid = Ubuntu upcoming release "Lucid Lynx" (lucid) +lucid = Ubuntu 10.04 LTS "Lucid Lynx" (lucid) +maverick = Ubuntu 10.10 "Maverick Meerkat" (maverick) +natty = Upcoming Ubuntu 11.04 "Natty Narwhal" (natty) + +[release backport ids] +# the purpose of these ids is to have version suffixes for backported packages +# that allow proper sorting (upgradability) across distribution releases +# For Debian we'll use ndXX (where XX is the version of the Debian release, +# e.g. 50; analog to backports.org) and for Ubuntu we'll use ndXX.XX. +data = nd +etch = nd40 +lenny = nd50 +squeeze = nd60 +wheezy = nd70 +sid = nd +hardy = nd08.04 +intrepid = nd08.10 +jaunty = nd09.04 +karmic = nd09.10 +lucid = nd10.04 +maverick = nd10.10 +natty = nd11.04 [nitrc ids] afni = 23 @@ -77,18 +134,22 @@ fslview = 25 gifti-bin = 75 imagej = 256 itksnap = 110 +jist = 228 libminc-dev = 129 -minc-tools = 129 libgiftiio-dev = 75 -libnifti1 = 26 -libnifti1-dev = 26 -nifti-bin = 26 -odin = 153 +libnifti2 = 26 +libnifti-dev = 26 +matlab-spm8 = 24 +minc-tools = 129 +mipav = 70 mitools = 153 mricron = 152 mrtrix = 128 +nifti-bin = 26 +odin = 153 python-mvpa = 162 python-nipype = 325 slicer = 50 +spm8 = 24 voxbo = 73