X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=neurodebian.cfg;h=b57c962b72ebe3e845104ff47b6cbb217383963d;hb=96f14b87ef31fcfd62a75d61b151a121baa50424;hp=5cd4d722c7923d9ae21a3a08dfb9122b0526c2f2;hpb=520ce63dcdaf4ac1d2495f8da908e9135524f2fb;p=neurodebian.git diff --git a/neurodebian.cfg b/neurodebian.cfg index 5cd4d72..b57c962 100644 --- a/neurodebian.cfg +++ b/neurodebian.cfg @@ -5,47 +5,164 @@ pkgquery_url = http://dde.debian.net/dde/q/udd # Packages listed in the following taskfiles will be featured on the website # _if_ they are also present in the repository select taskfiles = + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev + svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/psychology # Additional selection filter (similar to 'select taskfiles'), only listing # package names -select names = fsl-doc fslview-doc fsl-atlases fsl-possum-data fsl-first-data - fsl-feeds libnifti1 odin +select names = libnifti2 odin mitools afni-atlases python-pyssdh python-networkx + r-cran-glmnet python-rpy2 python-nibabel-snapshot + python-scikits-learn python-mdp python-mlpy python-openpyxl libgdf-dev matlab-support + svgtune rorden-mri-tutorial caret-data python-joblib python-sphinx fail2ban # Information about prospective packages to be imported from taskfiles prospective = + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev +[blend package aliases] +# alias a package name from a blend taskfile to an arbitray number of additional +# package names -- if the original name should appear in the package list it has +# to be added as an alias as well +cctools = coop-computing-tools +mni-icbm152-nlin-2009 = mni-icbm152-nlin-2009a mni-icbm152-nlin-2009b mni-icbm152-nlin-2009c +fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds fsl-mni152-templates +fslview = fslview fslview-doc +python-mvpa = python-mvpa python-mvpa-snapshot +libgiftiio-dev = libgiftiio-dev gifti-bin +openmeeg-tools = openmeeg-tools libopenmeeg-dev python-openmeeg libopenmeeg1 +libbiosig-dev = libbiosig-dev python-biosig octave-biosig biosig-tools libbiosig0 +libgdf-dev = libgdf-dev libgdf0 libgdf0-dbg libgdf-dev gdf-tools octave-gdf matlab-gdf +spm8 = matlab-spm8 spm8-data spm8-doc +libfreenect-dev = libfreenect0.0 libfreenect-dev libfreenect-demos python-freenect freenect +psychtoolbox-3 = octave-psychtoolbox-3 matlab-psychtoolbox-3 psychtoolbox-3-doc +openmeeg = libopenmeeg-dev libopenmeeg1 openmeeg-tools python-openmeeg +pysurfer = python-surfer +pyxnat = python-pyxnat + [mirrors] -us = http://neuro.debian.net/debian de = http://apsy.gse.uni-magdeburg.de/debian +gr = http://neurobot.bio.auth.gr/neurodebian +us-ca = http://neurodeb.pirsquared.org +us-nh = http://neuro.debian.net/debian +us-tn = http://masi.vuse.vanderbilt.edu/neurodebian + +[mirror names] +de = Germany (University of Magdeburg) +gr = Greece (Aristotle University of Thessaloniki) +us-ca = USA-CA (Paul Ivanov, California) +us-nh = USA-NH (Dartmouth College) +us-tn = USA-TN (Vanderbilt) [neurodebian] # Release files of all repositories to be contained in the website releases = + http://neuro.debian.net/debian/dists/data/Release http://neuro.debian.net/debian/dists/dapper/Release http://neuro.debian.net/debian/dists/gutsy/Release http://neuro.debian.net/debian/dists/hardy/Release http://neuro.debian.net/debian/dists/intrepid/Release http://neuro.debian.net/debian/dists/jaunty/Release + http://neuro.debian.net/debian/dists/karmic/Release + http://neuro.debian.net/debian/dists/lucid/Release + http://neuro.debian.net/debian/dists/maverick/Release + http://neuro.debian.net/debian/dists/natty/Release http://neuro.debian.net/debian/dists/etch/Release http://neuro.debian.net/debian/dists/lenny/Release http://neuro.debian.net/debian/dists/squeeze/Release + http://neuro.debian.net/debian/dists/wheezy/Release http://neuro.debian.net/debian/dists/sid/Release [release codenames] +# the 'data' entry should not be changed, as this exact setting also serves as +# a test condition in the DDE code +data = Datasets (data) etch = Debian GNU/Linux 4.0 (etch) lenny = Debian GNU/Linux 5.0 (lenny) -squeeze = Debian testing (squeeze) +squeeze = Debian GNU/Linux 6.0 (squeeze) +wheezy = Debian testing (wheezy) sid = Debian unstable (sid) -dapper = Ubuntu 6.06 LTS "Dapper Drake" (dapper) -edgy = Ubuntu 6.10 "Edgy Eft" (edgy) -gutsy = Ubuntu 7.10 "Gutsy Gibbon" (gutsy) -hardy = Ubuntu 8.04 LTS "Hardy Heron" (hardy) -intrepid = Ubuntu 8.10 "Intrepid Ibex" (intrepid) -jaunty = Ubuntu 9.04 "Jaunty Jackalope" (jaunty) -karmic = Ubuntu upcoming release (karmic) +# EOL: May 12 2011 (Desktop) April 2013 (Server) +hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy) +# EOL: Oct 23 2010 +jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty) +# EOL: April 2011 +karmic = Ubuntu 09.10 "Karmic Koala" (karmic) +# EOL: April 2013 (Desktop) April 2015 (Server) +lucid = Ubuntu 10.04 LTS "Lucid Lynx" (lucid) +# EOL: April 2012 +maverick = Ubuntu 10.10 "Maverick Meerkat" (maverick) +# EOL: October 2012 +natty = Ubuntu 11.04 "Natty Narwhal" (natty) +# EOL: April 2013 +oneiric = Upcoming Ubuntu 11.10 "Oneiric Ocelot" (oneiric) + +[release backport ids] +# the purpose of these ids is to have version suffixes for backported packages +# that allow proper sorting (upgradability) across distribution releases +# For Debian we'll use ndXX (where XX is the version of the Debian release, +# e.g. 50; analog to backports.org) and for Ubuntu we'll use ndXX.XX. +data = nd +etch = nd40 +lenny = nd50 +squeeze = nd60 +wheezy = nd70 +sid = nd +hardy = nd08.04 +intrepid = nd08.10 +jaunty = nd09.04 +karmic = nd09.10 +lucid = nd10.04 +maverick = nd10.10 +natty = nd11.04 +oneiric = nd11.10 + +[nitrc ids] +afni = 23 +ants = 130 +camino = 253 +caret = 34 +connectomeviewer = 355 +dicomnifti = 218 +fsl = 25 +fslview = 25 +gifti-bin = 75 +imagej = 256 +itksnap = 110 +jist = 228 +libminc-dev = 129 +libgiftiio-dev = 75 +libnifti2 = 26 +libnifti-dev = 26 +matlab-spm8 = 24 +minc-tools = 129 +mipav = 70 +mitools = 153 +mricron = 152 +mrtrix = 128 +nifti-bin = 26 +odin = 153 +python-mvpa = 162 +python-nipype = 325 +python-surfer = 517 +python-pyxnat = 453 +slicer = 50 +spm8 = 24 +voxbo = 73 +openmeeg = 514 +