X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=neurodebian.cfg;h=2a9532fce7319c97a4e4a0a1498846c4dabbf230;hb=6d51d902128dc489fa6bfa6af1ed731d882a1c78;hp=ed52527dcf5d99bd64437980fc38e1032ead150e;hpb=d19b66e0f3d047761e2fdf164f21f6b7b765e071;p=neurodebian.git diff --git a/neurodebian.cfg b/neurodebian.cfg index ed52527..2a9532f 100644 --- a/neurodebian.cfg +++ b/neurodebian.cfg @@ -5,21 +5,33 @@ pkgquery_url = http://dde.debian.net/dde/q/udd # Packages listed in the following taskfiles will be featured on the website # _if_ they are also present in the repository select taskfiles = + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev + svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/psychology # Additional selection filter (similar to 'select taskfiles'), only listing # package names select names = libnifti2 odin mitools afni-atlases python-pyssdh python-networkx r-cran-glmnet python-rpy2 python-nibabel-snapshot - python-scikits-learn python-mdp python-mlpy python-openpyxl + python-scikits-learn python-mdp python-mlpy python-openpyxl libgdf-dev matlab-support + svgtune rorden-mri-tutorial caret-data python-joblib python-sphinx fail2ban # Information about prospective packages to be imported from taskfiles prospective = + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling + svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev @@ -27,6 +39,7 @@ prospective = # alias a package name from a blend taskfile to an arbitray number of additional # package names -- if the original name should appear in the package list it has # to be added as an alias as well +cctools = coop-computing-tools mni-icbm152-nlin-2009 = mni-icbm152-nlin-2009a mni-icbm152-nlin-2009b mni-icbm152-nlin-2009c fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds fsl-mni152-templates fslview = fslview fslview-doc @@ -35,6 +48,14 @@ libgiftiio-dev = libgiftiio-dev gifti-bin openmeeg-tools = openmeeg-tools libopenmeeg-dev python-openmeeg libopenmeeg1 libbiosig-dev = libbiosig-dev python-biosig octave-biosig biosig-tools libbiosig0 libgdf-dev = libgdf-dev libgdf0 libgdf0-dbg libgdf-dev gdf-tools octave-gdf matlab-gdf +spm8 = matlab-spm8 spm8-data spm8-doc +libfreenect-dev = libfreenect0.0 libfreenect-dev libfreenect-demos python-freenect freenect +psychtoolbox-3 = octave-psychtoolbox-3 matlab-psychtoolbox-3 psychtoolbox-3-doc +openmeeg = libopenmeeg-dev libopenmeeg1 openmeeg-tools python-openmeeg +pandas = python-pandas +pysurfer = python-surfer +pyxnat = python-pyxnat +openwalnut = openwalnut-qt4 [mirrors] de = http://apsy.gse.uni-magdeburg.de/debian @@ -43,6 +64,13 @@ us-ca = http://neurodeb.pirsquared.org us-nh = http://neuro.debian.net/debian us-tn = http://masi.vuse.vanderbilt.edu/neurodebian +[mirror names] +de = Germany (University of Magdeburg) +gr = Greece (Aristotle University of Thessaloniki) +us-ca = USA-CA (Paul Ivanov, California) +us-nh = USA-NH (Dartmouth College) +us-tn = USA-TN (Vanderbilt) + [neurodebian] # Release files of all repositories to be contained in the website releases = @@ -55,31 +83,37 @@ releases = http://neuro.debian.net/debian/dists/karmic/Release http://neuro.debian.net/debian/dists/lucid/Release http://neuro.debian.net/debian/dists/maverick/Release + http://neuro.debian.net/debian/dists/natty/Release + http://neuro.debian.net/debian/dists/oneiric/Release http://neuro.debian.net/debian/dists/etch/Release http://neuro.debian.net/debian/dists/lenny/Release http://neuro.debian.net/debian/dists/squeeze/Release + http://neuro.debian.net/debian/dists/wheezy/Release http://neuro.debian.net/debian/dists/sid/Release [release codenames] # the 'data' entry should not be changed, as this exact setting also serves as # a test condition in the DDE code -data = Datasets +data = Datasets (data) etch = Debian GNU/Linux 4.0 (etch) lenny = Debian GNU/Linux 5.0 (lenny) -squeeze = Debian testing (squeeze) -#squeeze = Debian 6.0 (squeeze) -#wheezy = Debian testing (wheezy) +squeeze = Debian GNU/Linux 6.0 (squeeze) +wheezy = Debian testing (wheezy) sid = Debian unstable (sid) -#dapper = Ubuntu 06.06 LTS "Dapper Drake" (dapper) -#edgy = Ubuntu 06.10 "Edgy Eft" (edgy) -#gutsy = Ubuntu 07.10 "Gutsy Gibbon" (gutsy) +# EOL: May 12 2011 (Desktop) April 2013 (Server) hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy) -intrepid = Ubuntu 08.10 "Intrepid Ibex" (intrepid) +# EOL: Oct 23 2010 jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty) +# EOL: April 2011 karmic = Ubuntu 09.10 "Karmic Koala" (karmic) +# EOL: April 2013 (Desktop) April 2015 (Server) lucid = Ubuntu 10.04 LTS "Lucid Lynx" (lucid) +# EOL: April 2012 maverick = Ubuntu 10.10 "Maverick Meerkat" (maverick) -natty = Upcoming Ubuntu 11.04 "Natty Narwhal" (natty) +# EOL: October 2012 +natty = Ubuntu 11.04 "Natty Narwhal" (natty) +# EOL: April 2013 +oneiric = Ubuntu 11.10 "Oneiric Ocelot" (oneiric) [release backport ids] # the purpose of these ids is to have version suffixes for backported packages @@ -98,6 +132,8 @@ jaunty = nd09.04 karmic = nd09.10 lucid = nd10.04 maverick = nd10.10 +natty = nd11.04 +oneiric = nd11.10 [nitrc ids] afni = 23 @@ -111,20 +147,25 @@ fslview = 25 gifti-bin = 75 imagej = 256 itksnap = 110 +jist = 228 libminc-dev = 129 -minc-tools = 129 libgiftiio-dev = 75 libnifti2 = 26 libnifti-dev = 26 -nifti-bin = 26 -odin = 153 +matlab-spm8 = 24 +minc-tools = 129 +mipav = 70 mitools = 153 mricron = 152 mrtrix = 128 +nifti-bin = 26 +odin = 153 python-mvpa = 162 python-nipype = 325 +python-surfer = 517 +python-pyxnat = 453 slicer = 50 +spm8 = 24 voxbo = 73 -mipav = 70 -jist = 228 +openmeeg = 514