X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=nastreport.cpp;h=799793ece4dda8567d1dcb5a9865a70c9dd45f3e;hb=5b7ac70116137b52dd7884b76c5bca660a5fea38;hp=67ec702fdd122b732b0f7e0598fe54f791a121c8;hpb=a2edaadb975e5cb5d6cf68353bfe95f53235600d;p=mothur.git

diff --git a/nastreport.cpp b/nastreport.cpp
index 67ec702..799793e 100644
--- a/nastreport.cpp
+++ b/nastreport.cpp
@@ -48,14 +48,14 @@ void NastReport::print(){
 
 void NastReport::setCandidate(Sequence* candSeq){ 
 	queryName = candSeq->getName();
-	queryLength = candSeq->getUnalignLength();
+	queryLength = candSeq->getNumBases();
 }
 
 /******************************************************************************************************************/
 
 void NastReport::setTemplate(Sequence* tempSeq){ 
 	templateName = tempSeq->getName();
-	templateLength = tempSeq->getUnalignLength();
+	templateLength = tempSeq->getNumBases();
 }
 
 /******************************************************************************************************************/