X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=nameassignment.cpp;h=3d99551cc6a2a5f01932329c34c339a6fa5d9450;hb=a6cf29fa4dac0909c7582cb1094151d34093ee76;hp=0a62a032077fd58c5ee92c3801662a9e280f6df7;hpb=0c78e45408d8c099bc51579225ebfc227f7523b2;p=mothur.git diff --git a/nameassignment.cpp b/nameassignment.cpp index 0a62a03..3d99551 100644 --- a/nameassignment.cpp +++ b/nameassignment.cpp @@ -6,7 +6,7 @@ NameAssignment::NameAssignment(string nameMapFile){ m = MothurOut::getInstance(); - openInputFile(nameMapFile, fileHandle); + m->openInputFile(nameMapFile, fileHandle); } @@ -34,7 +34,7 @@ void NameAssignment::readMap(){ }else{ m->mothurOut(firstCol + " is already in namesfile. I will use first definition."); m->mothurOutEndLine(); } - gobble(fileHandle); + m->gobble(fileHandle); } fileHandle.close();