X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mothurout.h;h=db931b5a5e380169c3147ee8b0c9acb4d72f1a00;hb=2ff2d03fbe46ce8cf2738bff4403a52be4f31e2f;hp=9987374e6c824cafe4aaf343c319d5bca14f209b;hpb=3a5dd9e428ab93a6dcdce7912e8ebb977be0b893;p=mothur.git

diff --git a/mothurout.h b/mothurout.h
index 9987374..db931b5 100644
--- a/mothurout.h
+++ b/mothurout.h
@@ -97,7 +97,9 @@ class MothurOut {
 		int openOutputFileAppend(string, ofstream&);
         int openOutputFileBinaryAppend(string, ofstream&);
 		int openInputFile(string, ifstream&);
-		int openInputFile(string, ifstream&, string); //no error given 
+		int openInputFile(string, ifstream&, string); //no error given
+    
+        bool checkLocations(string&, string);  //filename, inputDir. checks for file in ./, inputdir, default and mothur's exe location.  Returns false if cant be found. If found completes name with location
 		string getline(ifstream&);
 		string getline(istringstream&);
 		void gobble(istream&);
@@ -138,6 +140,8 @@ class MothurOut {
 		bool isTrue(string);
 		bool isContainingOnlyDigits(string);
 		bool isNumeric1(string);
+        bool isLabelEquivalent(string, string);
+        string getSimpleLabel(string);
         string findEdianness();