X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mothurout.h;h=3cf6fa4963672b5d69acb7de389eb266b957ba24;hb=3914b0d6480f67df53b1e838f51c4e6155710434;hp=efb3823aa74fb162bc1e1d0090d3af958f89f777;hpb=ad4f75fd7c938090d3b1ce4cfefcc21edf1869eb;p=mothur.git

diff --git a/mothurout.h b/mothurout.h
index efb3823..3cf6fa4 100644
--- a/mothurout.h
+++ b/mothurout.h
@@ -93,7 +93,9 @@ class MothurOut {
 		string getRootName(string);
 		bool isBlank(string);
 		int openOutputFile(string, ofstream&);
+        int openOutputFileBinary(string, ofstream&);
 		int openOutputFileAppend(string, ofstream&);
+        int openOutputFileBinaryAppend(string, ofstream&);
 		int openInputFile(string, ifstream&);
 		int openInputFile(string, ifstream&, string); //no error given 
 		string getline(ifstream&);
@@ -153,6 +155,7 @@ class MothurOut {
         string makeList(vector<string>&);
         bool isSubset(vector<string>, vector<string>); //bigSet, subset
         int checkName(string&);
+        map<string, vector<string> > parseClasses(string);
 		
 		//math operation
 		int factorial(int num);