X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mothurout.cpp;h=5a0ea1281b3644e1c0b42035054f9f7f2e0cf0f6;hb=1c898913f53fe4c6574102896b967d9347d1b42a;hp=3205ae794165a5b8c045c473403d8a66b1b54f90;hpb=a834131359fd7cf3625df70d7e77ca90a159e9fd;p=mothur.git

diff --git a/mothurout.cpp b/mothurout.cpp
index 3205ae7..5a0ea12 100644
--- a/mothurout.cpp
+++ b/mothurout.cpp
@@ -1229,6 +1229,33 @@ float MothurOut::ceilDist(float dist, int precision){
 		exit(1);
 	}
 }
+/**********************************************************************************************************************/
+int MothurOut::readNames(string namefile, map<string, string>& nameMap) { 
+	try {
+		
+		//open input file
+		ifstream in;
+		openInputFile(namefile, in);
+		
+		while (!in.eof()) {
+			if (control_pressed) { break; }
+			
+			string firstCol, secondCol;
+			in >> firstCol >> secondCol; gobble(in);
+			
+			nameMap[firstCol] = secondCol;
+		}
+		in.close();
+		
+		return 0;
+		
+	}
+	catch(exception& e) {
+		errorOut(e, "MothurOut", "readNames");
+		exit(1);
+	}
+}
+
 /**********************************************************************************************************************/
 map<string, int> MothurOut::readNames(string namefile) { 
 	try {