X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mothurmetastats.cpp;fp=mothurmetastats.cpp;h=ae3ab802b2e4380c93655f2d6a6010beaf16f151;hb=d6c0a11d1cecfac18b323285e7ffadb7f58e848f;hp=ae822254c01ccdf7359ca319c44a2db5005f1fc4;hpb=731d19a6eaf81768ed35e4be25fbac5686a2a7a0;p=mothur.git

diff --git a/mothurmetastats.cpp b/mothurmetastats.cpp
index ae82225..ae3ab80 100644
--- a/mothurmetastats.cpp
+++ b/mothurmetastats.cpp
@@ -217,7 +217,7 @@ int MothurMetastats::runMetastats(string outputFileName, vector< vector<double>
 			if(qvalues[i] < threshold){
 				m->mothurOut("Feature " + toString((i+1)) + " is significant, q = "); 
 				cout << qvalues[i];
-				m->mothurOutJustToLog(toString(pvalues[i])); m->mothurOutEndLine();
+				m->mothurOutJustToLog(toString(qvalues[i])); m->mothurOutEndLine();
 			}	
 		}
 		
@@ -492,6 +492,12 @@ int MothurMetastats::calc_twosample_ts(vector<double>& Pmatrix, int secondGroupi
 vector<double> MothurMetastats::calc_qvalues(vector<double>& pValues) {
 	try {
 		
+       /* cout << "x <- c(" << pValues[0];
+        for (int l = 1; l < pValues.size(); l++){
+            cout << ", " << pValues[l];
+        }
+        cout << ")\n";*/
+        
 		int numRows = pValues.size();
 		vector<double> qvalues(numRows, 0.0);