X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mothur.cpp;h=c413cedeef8dac80a552349a48129dfb54d50a1d;hb=9013e13ecfb2fda3c2664a76f76cc99b8c7fa74c;hp=d674ff40470a6f485153d8ee90044ae878dfc427;hpb=8130a55348ef2b5f431fe47c6a83aae581e244b5;p=mothur.git

diff --git a/mothur.cpp b/mothur.cpp
index d674ff4..c413ced 100644
--- a/mothur.cpp
+++ b/mothur.cpp
@@ -12,7 +12,6 @@
 #include "globaldata.hpp"
 #include "mothurout.h"
 
-
 /**************************************************************************************************/
 
 GlobalData* GlobalData::_uniqueInstance = 0;
@@ -72,10 +71,36 @@ int main(int argc, char *argv[]){
 			m->mothurOutEndLine(); m->mothurOutEndLine();
 		#endif
 		
+		#ifdef MOTHUR_FILES
+			string temp = MOTHUR_FILES; 
+			
+			//add / to name if needed
+			string lastChar = temp.substr(temp.length()-1);
+			#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
+				if (lastChar != "/") { temp += "/"; }
+			#else
+				if (lastChar != "\\") { temp += "\\"; }	
+			#endif
+			
+			temp = getFullPathName(temp);
+			m->setDefaultPath(temp);
+			
+			m->mothurOutJustToLog("Using default file location " + temp);
+			m->mothurOutEndLine(); m->mothurOutEndLine();
+		#endif
+		
+		#ifdef BIT_VERSION
+			m->mothurOutJustToLog("Running 64Bit Version");
+			m->mothurOutEndLine(); m->mothurOutEndLine();
+		#else
+			m->mothurOutJustToLog("Running 32Bit Version");
+			m->mothurOutEndLine(); m->mothurOutEndLine();
+		#endif
+		
 		//header
-		m->mothurOut("mothur v.1.9");
+		m->mothurOut("mothur v.1.12.1");
 		m->mothurOutEndLine();		
-		m->mothurOut("Last updated: 4/16/2010");
+		m->mothurOut("Last updated: 7/29/2010");
 		m->mothurOutEndLine();	
 		m->mothurOutEndLine();		
 		m->mothurOut("by");