X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mgclustercommand.h;h=ea2c1de8603d746277017d8b557fcc5171c9af39;hb=f06b339c5fc4b6d1b9d2a08fe16bf7670bf7aeb4;hp=d5c784e27a28bb27e6b7cbdadbb8b94e25b199b5;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/mgclustercommand.h b/mgclustercommand.h
index d5c784e..ea2c1de 100644
--- a/mgclustercommand.h
+++ b/mgclustercommand.h
@@ -31,9 +31,11 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "mgcluster";	}
 	string getCommandCategory()		{ return "Clustering";	}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
-	string getCitation() { return "http://www.mothur.org/wiki/Mgcluster"; }
-	
+	string getCitation() { return "Schloss PD, Handelsman J (2008). A statistical toolbox for metagenomics. BMC Bioinformatics 9: 34. \nhttp://www.mothur.org/wiki/Mgcluster"; }
+	string getDescription()		{ return "cluster your sequences into OTUs using a blast file"; }
+
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }