X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mgclustercommand.cpp;fp=mgclustercommand.cpp;h=85db5e0e8ffc384960f7954d6db1266bac9ea3c1;hb=a935b75dd890da5ae7f09e5e6179f90ab2955348;hp=97f0afdb366949d39e5af37a96c0211d9df0ca17;hpb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;p=mothur.git

diff --git a/mgclustercommand.cpp b/mgclustercommand.cpp
index 97f0afd..85db5e0 100644
--- a/mgclustercommand.cpp
+++ b/mgclustercommand.cpp
@@ -240,7 +240,7 @@ int MGClusterCommand::execute(){
 			nameMap->readMap();
 		}else if (countfile != "") {
             ct = new CountTable();
-            ct->readTable(countfile, false);
+            ct->readTable(countfile, false, false);
             nameMap= new NameAssignment();
             vector<string> tempNames = ct->getNamesOfSeqs();
             for (int i = 0; i < tempNames.size(); i++) {  nameMap->push_back(tempNames[i]);  }