X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=metastatscommand.cpp;h=99a3043995b429bf4661a776f25f050262905412;hb=4de093e3b92bdab1579565cb2873553412f6671e;hp=4bb50ab107bb4fdde1d97b790cd15f3cb42d8599;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git

diff --git a/metastatscommand.cpp b/metastatscommand.cpp
index 4bb50ab..99a3043 100644
--- a/metastatscommand.cpp
+++ b/metastatscommand.cpp
@@ -52,7 +52,7 @@ string MetaStatsCommand::getHelpString(){
 		helpString += "The metastats command should be in the following format: metastats(design=yourDesignFile).\n";
 		helpString += "Example metastats(design=temp.design, groups=A-B-C).\n";
 		helpString += "The default value for groups is all the groups in your groupfile, and all labels in your inputfile will be used.\n";
-		helpString += "Note: No spaces between parameter labels (i.e. groups), '=' and parameters (i.e.yourGroups).\n\n";
+		helpString += "Note: No spaces between parameter labels (i.e. groups), '=' and parameters (i.e.yourGroups).\n";
 		return helpString;
 	}
 	catch(exception& e) {
@@ -83,6 +83,7 @@ MetaStatsCommand::MetaStatsCommand(string option) {
 		
 		//allow user to run help
 		if(option == "help") { help(); abort = true; calledHelp = true; }
+		else if(option == "citation") { citation(); abort = true; calledHelp = true;}
 		
 		else {
 			vector<string> myArray = setParameters();