X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mergegroupscommand.h;h=7f216ebed7653a2647c4770e4ce17e5e6d881e95;hb=8dd3c225255d7084e3aff8740aa4f1f1cabb367a;hp=7907dfe85f556682d1cc796323314a2f0c8d7b67;hpb=a44542a3c740cf957cff72ac71742f2fe48b0eaf;p=mothur.git

diff --git a/mergegroupscommand.h b/mergegroupscommand.h
index 7907dfe..7f216eb 100644
--- a/mergegroupscommand.h
+++ b/mergegroupscommand.h
@@ -38,10 +38,12 @@ private:
 	
 	bool abort, allLines, pickedGroups;
 	set<string> labels; //holds labels to be used
-	string groups, label, outputDir, inputDir, designfile, sharedfile;
+	string groups, label, outputDir, inputDir, designfile, sharedfile, groupfile;
 	vector<string> Groups, outputNames;
 		
 	int process(vector<SharedRAbundVector*>&, ofstream&);
+	int processSharedFile(GroupMap*&);
+	int processGroupFile(GroupMap*&);
 };
 
 #endif