X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mergefilecommand.h;fp=mergefilecommand.h;h=56da3152309ec3c422cccb3aa0c6abce9f92be46;hb=8bc3e5b38c2317a1715f53be22fa96455868c281;hp=bd94d77aa6cd8990545953b718c9f6254f44231c;hpb=f663afa231c9bc1b5e18e0ea3bdd2b2ee784f5b2;p=mothur.git diff --git a/mergefilecommand.h b/mergefilecommand.h index bd94d77..56da315 100644 --- a/mergefilecommand.h +++ b/mergefilecommand.h @@ -16,12 +16,18 @@ class MergeFileCommand : public Command { public: MergeFileCommand(string); + MergeFileCommand(); ~MergeFileCommand(); + vector getRequiredParameters(); + vector getValidParameters(); + vector getRequiredFiles(); + map > getOutputFiles() { return outputTypes; } int execute(); void help(); private: - vector fileNames; + vector fileNames, outputNames; + map > outputTypes; string outputFileName; int numInputFiles; bool abort;