X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=mantelcommand.h;h=644d9b21ded9302bc8be1eff6b011b17fec278ac;hb=16f9c4ab6f39769856b13e048eae2c8eaa413c02;hp=5b2fe6f347b5090991b7f1c83cb5a534e6c0c7f1;hpb=8f7f4fc08b8c70d9ef0f79607813dba4e926e102;p=mothur.git diff --git a/mantelcommand.h b/mantelcommand.h index 5b2fe6f..644d9b2 100644 --- a/mantelcommand.h +++ b/mantelcommand.h @@ -22,9 +22,11 @@ public: vector setParameters(); string getCommandName() { return "mantel"; } string getCommandCategory() { return "Hypothesis Testing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "McCune B, Grace JB, Urban DL (2002). Analysis of ecological communities. MjM Software Design: Gleneden Beach, OR. \nLegendre P, Legendre L (1998). Numerical Ecology. Elsevier: New York. \nhttp://www.mothur.org/wiki/Mantel"; } - + string getDescription() { return "Mantel’s test for correlation between matrices"; } + int execute(); void help() { m->mothurOut(getHelpString()); }