X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fyule.Rd;h=c9a07de0dbd3e498984f9078cd8648edcc4ca5fe;hb=2014b83971be4b9cd1644d6127837df798e9335c;hp=8b3d406ddb8192e2869bb998d2c54bddb0f4ddba;hpb=c827059eeafc8cbe41c812b26979543ab287803e;p=ape.git diff --git a/man/yule.Rd b/man/yule.Rd index 8b3d406..c9a07de 100644 --- a/man/yule.Rd +++ b/man/yule.Rd @@ -1,6 +1,6 @@ \name{yule} \alias{yule} -\title{Fits Yule Model to a Phylogenetic Tree} +\title{Fits the Yule Model to a Phylogenetic Tree} \usage{ yule(phy, use.root.edge = FALSE) } @@ -10,7 +10,7 @@ yule(phy, use.root.edge = FALSE) edge in the calculations.} } \description{ - This function fits by maximum likelihood a Yule model, i.e. a + This function fits by maximum likelihood a Yule model, i.e., a birth-only model to the branching times computed from a phylogenetic tree. } @@ -40,7 +40,7 @@ yule(phy, use.root.edge = FALSE) \item{se}{the standard-error of lambda.} \item{loglik}{the log-likelihood at its maximum.} } -\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}} +\author{Emmanuel Paradis} \seealso{ \code{\link{branching.times}}, \code{\link{diversi.gof}}, \code{\link{diversi.time}}, \code{\link{ltt.plot}},