X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fseg.sites.Rd;h=d03b56aa15e81f2014b3af1240465faa4932b2da;hb=80d1c453d63d6aec18f0b731d59918b99e189d86;hp=19efd2b1b31d7d51da2b0034ad21f2dd75894823;hpb=c827059eeafc8cbe41c812b26979543ab287803e;p=ape.git

diff --git a/man/seg.sites.Rd b/man/seg.sites.Rd
index 19efd2b..d03b56a 100644
--- a/man/seg.sites.Rd
+++ b/man/seg.sites.Rd
@@ -15,12 +15,13 @@ seg.sites(x)
 }
 \details{
   If the sequences are in a list, all the sequences must be of the same
-  length.
+  length. Ambiguous nucleotides are ignored.
 }
 \value{
-  A numeric vector giving the indices of the segregating sites.
+  A numeric (integer) vector giving the indices of the segregating
+  sites.
 }
-\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}}
+\author{Emmanuel Paradis}
 \note{
   The present version looks for the sites which are ``variable'' in the
   data in terms of different \emph{letters}. This may give unexpected