X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fseg.sites.Rd;h=81f046ae9d57fa331192dafb901f5d35a5c32975;hb=2014b83971be4b9cd1644d6127837df798e9335c;hp=8f97c52ec16e6b98c70da739059b1f9d29748d5f;hpb=8883719a9139685f26d4c0c4cb26872d5f6d0d96;p=ape.git diff --git a/man/seg.sites.Rd b/man/seg.sites.Rd index 8f97c52..81f046a 100644 --- a/man/seg.sites.Rd +++ b/man/seg.sites.Rd @@ -21,15 +21,15 @@ seg.sites(x) A numeric (integer) vector giving the indices of the segregating sites. } -\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}} +\author{Emmanuel Paradis} \note{ The present version looks for the sites which are ``variable'' in the data in terms of different \emph{letters}. This may give unexpected results if there are ambiguous bases in the data. } \seealso{ - \code{\link{base.freq}}, \code{\link{GC.content}}, - \code{\link{theta.s}}, \code{\link{nuc.div}} + \code{\link{base.freq}}, \code{\link[pegas]{theta.s}}, + \code{\link[pegas]{nuc.div}} } \examples{ data(woodmouse)