X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fplot.phylo.Rd;h=f19db415317559caa2c338cf9d3b677b6ad6d3db;hb=1ad48c7a70983375138a6500372db588c8a3a134;hp=f6a137cc3fbb9d3372d3df7d807c1266c274a753;hpb=80d1c453d63d6aec18f0b731d59918b99e189d86;p=ape.git

diff --git a/man/plot.phylo.Rd b/man/plot.phylo.Rd
index f6a137c..f19db41 100644
--- a/man/plot.phylo.Rd
+++ b/man/plot.phylo.Rd
@@ -9,7 +9,8 @@
     cex = par("cex"), adj = NULL, srt = 0, no.margin = FALSE,
     root.edge = FALSE, label.offset = 0, underscore = FALSE,
     x.lim = NULL, y.lim = NULL, direction = "rightwards",
-    lab4ut = "horizontal", tip.color = "black", ...)
+    lab4ut = "horizontal", tip.color = "black", plot = TRUE,
+    rotate.tree = 0, ...)
 \method{plot}{multiPhylo}(x, layout = 1, ...)
 }
 \arguments{
@@ -90,9 +91,15 @@
     \code{type = "unrooted"}.}
   \item{tip.color}{the colours used for the tip labels, eventually
     recycled (see examples).}
+  \item{plot}{a logical controlling whether to draw the tree. If
+    \code{FALSE}, the graphical device is set as if the tree was
+    plotted, and the coordinates are saved as well.}
   \item{layout}{the number of trees to be plotted simultaneously.}
   \item{\dots}{further arguments to be passed to \code{plot} or to
     \code{plot.phylo}.}
+  \item{rotate.tree}{for "fan", "unrooted", or "radial" trees: the
+    rotation of the whole tree in degrees (negative values are
+    accepted).}
 }
 \description{
   These functions plot phylogenetic trees on the current graphical