X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fphymltest.Rd;h=365620fd2e4a0dfa3c8bb9830dc66947a3f6f2c6;hb=4ef7ac2c31da7b7c70a31f1f95a1182d22c3a71a;hp=762aee18016b2d48a8c21118eb847bce6897bea4;hpb=8e2e1ceb81f455bcb7b184d114913295d67b93c4;p=ape.git diff --git a/man/phymltest.Rd b/man/phymltest.Rd index 762aee1..365620f 100644 --- a/man/phymltest.Rd +++ b/man/phymltest.Rd @@ -42,7 +42,7 @@ phymltest(seqfile, format = "interleaved", itree = NULL, \description{ This function calls PhyML and fits successively 28 models of DNA evolution. The results are saved on disk, as PhyML usually does, and - returned in R as a vector with the log-likelihood value of each model. + returned in \R as a vector with the log-likelihood value of each model. } \details{ The present function requires version 3.0.1 of PhyML; it won't work with @@ -117,7 +117,7 @@ phymltest(seqfile, format = "interleaved", itree = NULL, \emph{Systematic Biology}, \bold{52}, 696--704. \url{http://www.atgc-montpellier.fr/phyml/} } -\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}} +\author{Emmanuel Paradis} \seealso{ \code{\link{read.tree}}, \code{\link{write.tree}}, \code{\link{dist.dna}}