X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fis.monophyletic.Rd;h=1c170a753a05700be49d2416330e17ad0c3a939a;hb=3ece2ec76da287a8a86339827cc44e193fe16cdd;hp=45aafe14808233674719a2c4efca38edeaae7627;hpb=8583b8f50f7747a557dbaf6678207da5108087f9;p=ape.git diff --git a/man/is.monophyletic.Rd b/man/is.monophyletic.Rd index 45aafe1..1c170a7 100644 --- a/man/is.monophyletic.Rd +++ b/man/is.monophyletic.Rd @@ -4,7 +4,7 @@ Is Group Monophyletic } \usage{ -is.monophyletic(phy, tips, reroot = NULL, plot = FALSE, ...) +is.monophyletic(phy, tips, reroot = !is.rooted(phy), plot = FALSE, ...) } \description{ This function tests whether a list of tip labels is monophyletic on a given tree. @@ -22,7 +22,7 @@ is.monophyletic(phy, tips, reroot = NULL, plot = FALSE, ...) \item{plot}{ a logical. If \code{TRUE}, then the tree is plotted with the specified group \code{tips} highlighted. } - \item{...}{ + \item{\dots}{ further arguments passed to \code{plot}. } }