X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fdist.dna.Rd;h=b2c270a3bf8dfa8845a304f9b924f98912389cdd;hb=42bf3d36a0a2a5edd0071739ad346ae9009abffa;hp=49571b17ee657dafb09e819ac29f5068efcfa043;hpb=762d28a9a2b50774a29b3d58a1e84fde4b6f898f;p=ape.git diff --git a/man/dist.dna.Rd b/man/dist.dna.Rd index 49571b1..b2c270a 100644 --- a/man/dist.dna.Rd +++ b/man/dist.dna.Rd @@ -7,7 +7,9 @@ dist.dna(x, model = "K80", variance = FALSE, base.freq = NULL, as.matrix = FALSE) } \arguments{ - \item{x}{a matrix or a list containing the DNA sequences.} + \item{x}{a matrix or a list containing the DNA sequences; this must be + of class \code{"DNAbin"} (use \code{\link{as.DNAbin}} is they are + stored as character).} \item{model}{a character string specifying the evlutionary model to be used; must be one of \code{"raw"}, \code{"N"}, \code{"JC69"}, \code{"K80"} (the default), \code{"F81"}, \code{"K81"},