X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2Fdist.dna.Rd;h=394baf57ba2ec75423650b190c66d505033c2341;hb=82dd3702485179ba5408f1e3e57eb856d025e16c;hp=49571b17ee657dafb09e819ac29f5068efcfa043;hpb=762d28a9a2b50774a29b3d58a1e84fde4b6f898f;p=ape.git

diff --git a/man/dist.dna.Rd b/man/dist.dna.Rd
index 49571b1..394baf5 100644
--- a/man/dist.dna.Rd
+++ b/man/dist.dna.Rd
@@ -7,7 +7,9 @@ dist.dna(x, model = "K80", variance = FALSE,
          base.freq = NULL, as.matrix = FALSE)
 }
 \arguments{
-  \item{x}{a matrix or a list containing the DNA sequences.}
+  \item{x}{a matrix or a list containing the DNA sequences; this must be
+    of class \code{"DNAbin"} (use \code{\link{as.DNAbin}} is they are
+    stored as character).}
   \item{model}{a character string specifying the evlutionary model to be
     used; must be one of \code{"raw"}, \code{"N"}, \code{"JC69"},
     \code{"K80"} (the default), \code{"F81"}, \code{"K81"},
@@ -174,7 +176,7 @@ dist.dna(x, model = "K80", variance = FALSE,
   substitutions in the control region of mitochondrial DNA in humans and
   chimpanzees. \emph{Molecular Biology and Evolution}, \bold{10}, 512--526.
 }
-\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}}
+\author{Emmanuel Paradis}
 \seealso{
   \code{\link{read.GenBank}}, \code{\link{read.dna}},
   \code{\link{write.dna}},  \code{\link{DNAbin}},