X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2FcorPagel.Rd;h=096a24844d61300d13e28e8697c1cde1fe4530fd;hb=f512087dd94a7dc3462a9f31b48f61214cdc0f5e;hp=4509b4493ef0c7dc358aacb11f2801cc7d27795e;hpb=0eb732cf743bc38c934b860fc6df60aa248b3034;p=ape.git diff --git a/man/corPagel.Rd b/man/corPagel.Rd index 4509b44..096a248 100644 --- a/man/corPagel.Rd +++ b/man/corPagel.Rd @@ -11,11 +11,11 @@ corPagel(value, phy, form = ~1, fixed = FALSE) } \arguments{ \item{value}{the (initial) value of the parameter - \eqn{\gamma}{gamma}.} + \eqn{\lambda}{lambda}.} \item{phy}{an object of class \code{"phylo"}.} \item{form}{(ignored).} \item{fixed}{a logical specifying whether \code{gls} should - estimate \eqn{\gamma}{gamma} (the default) or keep it fixed.} + estimate \eqn{\lambda}{lambda} (the default) or keep it fixed.} \item{object}{an (initialized) object of class \code{"corPagel"}.} \item{covariate}{(ignored).} \item{corr}{a logical value specifying whether to return the @@ -29,7 +29,7 @@ corPagel(value, phy, form = ~1, fixed = FALSE) \description{ The correlation structure from the present model is derived from the Brownian motion model by multiplying the off-diagonal elements (i.e., - the covariances) by \eqn{\gamma}{gamma}. The variances are thus the + the covariances) by \eqn{\lambda}{lambda}. The variances are thus the same than for a Brownian motion model. } \value{