X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2FcorClasses.Rd;h=fc5d7ff8102fb7abaf10472dbc74e54ca42d6f67;hb=1f8c4f7bf4f7100178bd11f274247ae9fac1b876;hp=c7679be5ed228e968d664944b0916405e9e863da;hpb=048cc125137aa5f9270ce02207ccaa8be02e53a8;p=ape.git diff --git a/man/corClasses.Rd b/man/corClasses.Rd index c7679be..fc5d7ff 100644 --- a/man/corClasses.Rd +++ b/man/corClasses.Rd @@ -6,11 +6,14 @@ Classes of phylogenetic correlation structures (\code{"corPhyl"}) available in \pkg{ape}. - \item{corBrownian}{Brownian motion model (Felsenstein 1985)} - \item{corMartins}{The covariance matrix defined in Martins and Hansen - (1997)} - \item{corGrafen}{The covariance matrix defined in Grafen (1989)} - \item{corPagel}{The covariance matrix defined in Freckelton et al. (2002)} + \itemize{ + \item{corBrownian}{Brownian motion model (Felsenstein 1985)} + \item{corMartins}{The covariance matrix defined in Martins and Hansen + (1997)} + \item{corGrafen}{The covariance matrix defined in Grafen (1989)} + \item{corPagel}{The covariance matrix defined in Freckelton et al. (2002)} + \item{corBlomberg}{The covariance matrix defined in Blomberg et al. (2003)} + } See the help page of each class for references and detailed description. @@ -19,7 +22,7 @@ \code{\link[nlme]{corClasses}} and \code{\link[nlme]{gls}} in the \pkg{nlme} librarie, \code{\link{corBrownian}}, \code{\link{corMartins}}, \code{\link{corGrafen}}, - \code{\link{corPagel}} + \code{\link{corPagel}}, \code{\link{corBlomberg}} } \author{Julien Dutheil \email{julien.dutheil@univ-montp2.fr}, Emmanuel Paradis}