X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=man%2FDNAbin.Rd;h=e9535306f1ec2f4dd2a16f4d7b34fe73c7793707;hb=80d1c453d63d6aec18f0b731d59918b99e189d86;hp=18d112a81b086c1664e4427d9f985daac0039246;hpb=50912ceb91f34227ae89432b6e6a8969a3a3f5f7;p=ape.git diff --git a/man/DNAbin.Rd b/man/DNAbin.Rd index 18d112a..e953530 100644 --- a/man/DNAbin.Rd +++ b/man/DNAbin.Rd @@ -42,7 +42,7 @@ are dropped.} \item{i, j}{indices of the rows and/or columns to select or to drop. They may be numeric, logical, or character (in the same way than for - standard R objects).} + standard \R objects).} \item{drop}{logical; if \code{TRUE}, the returned object is of the lowest possible dimension.} \item{recursive}{for compatibility with the generic (unused).} @@ -50,7 +50,7 @@ \details{ These are all `methods' of generic functions which are here applied to DNA sequences stored as objects of class \code{"DNAbin"}. They are - used in the same way than the standard R functions to manipulate + used in the same way than the standard \R functions to manipulate vectors, matrices, and lists. Additionally, the operators \code{[[} and \code{$} may be used to extract a vector from a list. Note that the default of \code{drop} is not the same than the generic operator: @@ -85,7 +85,8 @@ \author{Emmanuel Paradis} \seealso{ \code{\link{as.DNAbin}}, \code{\link{read.dna}}, - \code{\link{read.GenBank}}, \code{\link{write.dna}} + \code{\link{read.GenBank}}, \code{\link{write.dna}}, , + \code{\link{image.DNAbin}} The corresponding generic functions are documented in the package \pkg{base}.