X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=makegroupcommand.h;fp=makegroupcommand.h;h=1206938205b6fec35b5252e75f21d7d45af5522b;hb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;hp=e836d20f50b7b04e6cedefbb4f01616f6380b538;hpb=36a867cbd85d9c276d3c8d13f25a150bbbe2466b;p=mothur.git diff --git a/makegroupcommand.h b/makegroupcommand.h index e836d20..1206938 100644 --- a/makegroupcommand.h +++ b/makegroupcommand.h @@ -17,20 +17,21 @@ class MakeGroupCommand : public Command { public: MakeGroupCommand(string); MakeGroupCommand(); - ~MakeGroupCommand(); - vector getRequiredParameters(); - vector getValidParameters(); - vector getRequiredFiles(); - map > getOutputFiles() { return outputTypes; } + ~MakeGroupCommand(){} + + vector setParameters(); + string getCommandName() { return "make.group"; } + string getCommandCategory() { return "General"; } + string getHelpString(); + int execute(); - void help(); + void help() { m->mothurOut(getHelpString()); } private: string fastaFileName, groups, outputDir, filename, output; vector fastaFileNames; vector groupsNames, outputNames; - map > outputTypes; bool abort; };