X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=makefastqcommand.h;fp=makefastqcommand.h;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=1c209aab392f82a06ec5bce2d92811e20286df69;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/makefastqcommand.h b/makefastqcommand.h
deleted file mode 100644
index 1c209aa..0000000
--- a/makefastqcommand.h
+++ /dev/null
@@ -1,48 +0,0 @@
-#ifndef MAKEFASTQCOMMAND_H
-#define MAKEFASTQCOMMAND_H
-
-/*
- *  makefastqcommand.h
- *  mothur
- *
- *  Created by westcott on 2/14/11.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-
-#include "command.hpp"
-
-class MakeFastQCommand : public Command {
-	
-public:
-	
-	MakeFastQCommand(string);	
-	MakeFastQCommand();
-	~MakeFastQCommand(){}
-	
-	vector<string> setParameters();
-	string getCommandName()			{ return "make.fastq";				}
-	string getCommandCategory()		{ return "Sequence Processing";		}
-	string getHelpString();	
-	string getCitation() { return "http://www.mothur.org/wiki/Make.fastq"; }
-	string getDescription()		{ return "creates a fastq file from a fasta and quality file"; }
-
-	
-	int execute(); 
-	void help() { m->mothurOut(getHelpString()); }	
-	
-	
-private:
-	
-	string fastafile, qualfile, outputDir;
-	bool abort;
-	vector<string> outputNames;
-	
-	string convertQual(vector<int>);
-	
-};
-
-#endif
-
-