X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=makefastqcommand.cpp;h=0f6e030bb0d1fec3f7cf99614fa0827c66de2bb5;hb=d205e70ae86dbee2efc2df02f2717975854de6ba;hp=82f730159c000888e544308ddfb58289a3363fc2;hpb=7bf9a81bba76538ecaf351ae208de3da4bf1b6dd;p=mothur.git

diff --git a/makefastqcommand.cpp b/makefastqcommand.cpp
index 82f7301..0f6e030 100644
--- a/makefastqcommand.cpp
+++ b/makefastqcommand.cpp
@@ -181,7 +181,7 @@ int MakeFastQCommand::execute(){
 		qFile.close();
 		out.close();
 		
-		if (m->control_pressed) { for (int i = 0; i < outputNames.size(); i++) {	remove(outputNames[i].c_str()); } return 0; }
+		if (m->control_pressed) { for (int i = 0; i < outputNames.size(); i++) {	m->mothurRemove(outputNames[i]); } return 0; }
 		
 		m->mothurOutEndLine();
 		m->mothurOut("Output File Names: "); m->mothurOutEndLine();
@@ -201,7 +201,7 @@ string MakeFastQCommand::convertQual(vector<int> qual) {
 	try {
 		string qualScores;
 		
-		int controlChar = int('!');
+		int controlChar = int('@');
 		
 		for (int i = 0; i < qual.size(); i++) { 
 			int temp = qual[i] + controlChar;