X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=makebiomcommand.h;h=8a458fe33a398de607ffe05e48a5950b9368353c;hb=159fd324dfecacb6617669246d85c787ae67f630;hp=31077aecb64add7041ec1ac0cb3ae9ecf5bba232;hpb=aa23898d895a8c04cc4582a8809343df0aef6622;p=mothur.git

diff --git a/makebiomcommand.h b/makebiomcommand.h
index 31077ae..8a458fe 100644
--- a/makebiomcommand.h
+++ b/makebiomcommand.h
@@ -25,6 +25,7 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "make.biom";	}
 	string getCommandCategory()		{ return "General";		}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
 	string getCitation() { return "http://biom-format.org/documentation/biom_format.html, http://www.mothur.org/wiki/Make.biom"; }
 	string getDescription()		{ return "creates a biom file"; }
@@ -42,6 +43,7 @@ private:
     
     int getBiom(vector<SharedRAbundVector*>&);
     vector<string> getMetaData(vector<SharedRAbundVector*>&);
+    vector<string> parseTax(string tax, vector<string>& scores);
 };