X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=linearalgebra.h;h=321f46a1e283b6f4113b8dfd8242b0dfa190cc4e;hb=8dd3c225255d7084e3aff8740aa4f1f1cabb367a;hp=332101853e97ee2ff630f6792dc926c4aa9f4da4;hpb=943d3038553f82378567d3b651969146716e5862;p=mothur.git

diff --git a/linearalgebra.h b/linearalgebra.h
index 3321018..321f46a 100644
--- a/linearalgebra.h
+++ b/linearalgebra.h
@@ -25,10 +25,16 @@ public:
 	int qtli(vector<double>&, vector<double>&, vector<vector<double> >&);
 	vector< vector<double> > calculateEuclidianDistance(vector<vector<double> >&, int); //pass in axes and number of dimensions
 	vector< vector<double> > calculateEuclidianDistance(vector<vector<double> >&); //pass in axes
+	vector<vector<double> > getObservedEuclideanDistance(vector<vector<double> >&);
 	double calcPearson(vector<vector<double> >&, vector<vector<double> >&);
 	double calcSpearman(vector<vector<double> >&, vector<vector<double> >&);
 	double calcKendall(vector<vector<double> >&, vector<vector<double> >&);
 	
+	double calcPearson(vector<double>&, vector<double>&, double&);
+	double calcSpearman(vector<double>&, vector<double>&, double&);
+	double calcKendall(vector<double>&, vector<double>&, double&);
+	
+
 private:
 	MothurOut* m;