X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=libshuffcommand.h;h=1c8fbc4da656bf5c4240c1be8cb4a7843b3ac72c;hb=9946a1b4b50969d08ce059b248bdeecafbf989ac;hp=da5f9e8c1d3d06cd7ad3812578ec83bf6bff5774;hpb=315e38cf393c82be238da5b32574f225a020d25c;p=mothur.git

diff --git a/libshuffcommand.h b/libshuffcommand.h
index da5f9e8..1c8fbc4 100644
--- a/libshuffcommand.h
+++ b/libshuffcommand.h
@@ -29,8 +29,8 @@ private:
 	vector<string> groupNames;
 	
 	void setGroups();
-	void printCoverageFile();
-	void printSummaryFile();
+	int printCoverageFile();
+	int printSummaryFile();
 
 	GlobalData* globaldata;
 	FullMatrix* matrix;
@@ -44,7 +44,7 @@ private:
 
 	bool abort;
 	string outputFile, groups, userform, savegroups, outputDir;
-	vector<string> Groups; //holds groups to be used
+	vector<string> Groups, outputNames; //holds groups to be used
 };
 
 #endif