X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=libshuffcommand.cpp;h=1d1d41fadb4ca36994cefa4dc1c2d608126a93b1;hb=36a6b02cf7f09d2bc34376b588944a9ca73429c5;hp=1e8102f49f40753d239f8188f1a88cc9e3578587;hpb=55386dddad84cc1140d736cabaf4dd0ae16f2e01;p=mothur.git

diff --git a/libshuffcommand.cpp b/libshuffcommand.cpp
index 1e8102f..1d1d41f 100644
--- a/libshuffcommand.cpp
+++ b/libshuffcommand.cpp
@@ -170,13 +170,13 @@ LibShuffCommand::LibShuffCommand(string option)  {
 				
 			string temp;
 			temp = validParameter.validFile(parameters, "iters", false);				if (temp == "not found") { temp = "10000"; }
-			convert(temp, iters); 
+			m->mothurConvert(temp, iters); 
 			
 			temp = validParameter.validFile(parameters, "cutoff", false);				if (temp == "not found") { temp = "1.0"; }
-			convert(temp, cutOff); 
+			m->mothurConvert(temp, cutOff); 
 			
 			temp = validParameter.validFile(parameters, "step", false);				if (temp == "not found") { temp = "0.01"; }
-			convert(temp, step); 
+			m->mothurConvert(temp, step); 
 			
 			temp = validParameter.validFile(parameters, "sim", false);				if (temp == "not found") { temp = "F"; }
 			sim = m->isTrue(temp);