X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=knn.cpp;h=81b21b265785c2f8a83392ee52e7aeffbc9d4370;hb=250e3b11b1c9c1e1ad458ab6c7e71ac2e67e11d9;hp=837fa6d18d4f1aed6cf34e5861942b4230c30dd1;hpb=16abd6271c455bd01b34ff89a2e3641bef0fa128;p=mothur.git

diff --git a/knn.cpp b/knn.cpp
index 837fa6d..81b21b2 100644
--- a/knn.cpp
+++ b/knn.cpp
@@ -14,6 +14,7 @@ Knn::Knn(string tfile, string tempFile, string method, int kmerSize, float gapOp
 : Classify(), num(n), search(method) {
 	try {
 		threadID = tid;
+        shortcuts = true;
 		
 		//create search database and names vector
 		generateDatabaseAndNames(tfile, tempFile, method, kmerSize, gapOpen, gapExtend, match, misMatch);