X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=kmerdb.hpp;h=becdeda7fa5f343b9d5d54e81c0e5df62a1661b6;hb=b20d7d9b1b0eeeaedb78d8fdf26833fd212d2e81;hp=b64412d259a85870c57253249a4e355193476c9a;hpb=63e089e0b3aad1741bab60119ed7ccc784dce347;p=mothur.git

diff --git a/kmerdb.hpp b/kmerdb.hpp
index b64412d..becdeda 100644
--- a/kmerdb.hpp
+++ b/kmerdb.hpp
@@ -26,12 +26,16 @@ class KmerDB : public Database {
 	
 public:
 	KmerDB(string, int);
+	KmerDB();
 	~KmerDB();
 	
 	void generateDB();
 	void addSequence(Sequence);
 	vector<int> findClosestSequences(Sequence*, int);
 	void readKmerDB(ifstream&);
+	int getCount(int);  //returns number of sequences with that kmer number
+	vector<int> getSequencesWithKmer(int);  //returns vector of sequences that contain kmer passed in
+	int getMaxKmer() { return maxKmer; }
 	
 private: